Publications and Presentations

1. Mukhopadhyay S, Thatoi PK, Pandey AD, Das BK, Ravindran B, Bhattacharjee S , Mohapatra SK. Transcriptomic meta-analysis reveals up-regulation of gene expression functional in osteoclast differentiation in human septic shock. PLoS One. 2017 Feb 15;12(2):e0171689.


2. Samanwoy Mukhopadhyay, Abhay D Pandey, Samsiddhi Bhattacharjee, Saroj K Mohapatra. Pathway-level meta-analysis reveals transcriptional signature of septic shock. Critical Care 2016, 20(Suppl 1):P7


3. Sujay Datta, Xiao-Qin Xia, Samsiddhi Bhattacharjee, and Zhenyu Jia: Advances in Statistical Medicine. Computational and Mathematical Methods in Medicine, 2014 vol. 2014, Article ID 316153, 2 pages, 2014. doi:10.1155/2014/316153


4. Li WQ, Pfeiffer RM, Hyland PL, Shi J, Gu F, Wang Z, Bhattacharjee S, Luo J, Xiong X, Yeager M, Deng X, Hu N, Taylor PR, Albanes D, Caporaso NE, Gapstur SM, Amundadottir L, Chanock SJ, Chatterjee N, Landi MT, Tucker MA, Goldstein AM, Yang XR: Genetic polymorphisms in the 9p21 region associated with risk of multiple cancers. Carcinogenesis. 2014 Dec;35(12):2698-705.


5. Cara L. Carty, Samsiddhi Bhattacharjee, Jeff Haessler, Iona Cheng, Lucia A. Hindorff, Vanita Aroda, Christopher S. Carlson, Chun-Nan Hsu, Lynne Wilkens, Simin Liu, Elizabeth Selvin, Rebecca Jackson, Kari E. North, Ulrike Peters, James S. Pankow, Nilanjan Chatterjee and Charles Kooperberg: Analysis of metabolic syndrome components in >15 000 african americans identifies pleiotropic variants: results from the population architecture using genomics and epidemiology study. Circ Cardiovasc Genet 2014 Aug;7(4):505-13. Epub 2014 Jul 14.


6. Sreedhar Chinnaswamy, Snehajyoti Chatterjee, Ramachandran Boopathi, Shuvolina Mukherjee, Samsiddhi Bhattacharjee and Tapas K. Kundu: A single nucleotide polymorphism associated with hepatitis C virus infections located in the distal region of the IL28B promoter influences NF-kB-mediated gene transcription. PLoS ONE 2013 Oct 8;8(10):e75495.


7. F Gu, R M Pfeiffer, S Bhattacharjee, S S Han, P R Taylor, S Berndt, H Yang, A J Sigurdson, J Toro, L Mirabello, M H Greene, N D Freedman, C C Abnet, S M Dawsey,NHu, Y-L Qiao, T Ding, A V Brenner, M Garcia-Closas, R Hayes, L A Brinton, J Lissowska, N Wentzensen, C Kratz, L E Moore, R G Ziegler, W-H Chow, S A Savage, L Burdette, M Yeager, S J Chanock, N Chatterjee, M A Tucker, A M Goldstein and X R Yang: Common genetic variants in the 9p21 region and their associations with multiple tumours. Br J Cancer 2013 Apr 2;108(6):1378-86.


8. Max Leenders, Samsiddhi Bhattacharjee, Paolo Vineis, Victoria Stevens, H. Bas Bueno-de-Mesquita, Xiao-Ou Shu, Laufey Amundadottir, Myron Gross, Geoffrey S. Tobias, Jean Wactawski-Wende, Alan A. Arslan, Eric J. Duell, Charles S. Fuchs, Steven Gallinger, Patricia Hartge, Robert N. Hoover, Elizabeth A. Holly, Eric J. Jacobs, Alison P. Klein, Charles Kooperberg, Andrea LaCroix, Donghui Li, Margaret T. Mandelson, Sara H. Olson, Gloria Petersen, Harvey A. Risch, Kai Yu, Brian M. Wolpin, Wei Zheng, Ilir Agalliu, Demetrius Albanes, Marie-Christine Boutron-Ruault, Paige M. Bracci, Julie E. Buring, Federico Canzian, Kenneth Chang, Stephen J. Chanock, Michelle Cotterchio, J. Michael Gaziano, Edward L. Giovanucci, Michael Goggins, Göran Hallmans, Susan E. Hankinson, Judith A. Hoffman-Bolton, David J. Hunter, Amy Hutchinson, Kevin B. Jacobs, Mazda Jenab, Kay-Tee Khaw, Peter Kraft, Vittorio Krogh, Robert C. Kurtz, Robert R. McWilliams, Julie B. Mendelsohn, Alpa V. Patel, Kari G. Rabe, Elio Riboli, Anne Tjønneland, Dimitrios Trichopoulos, Jarmo Virtamo, Kala Visvanathan, Joanne W. Elena, Herbert Yu, Anne Zeleniuch-Jacquotte, Rachael Z. Stolzenberg-Solomon: Polymorphisms in genes related to one-carbon metabolism are not related to pancreatic cancer in PanScan and PanC4. Cancer Causes Control 2013 Mar;24(3):595-602.


9. Samsiddhi Bhattacharjee, Preetha Rajaraman, Kevin B Jacobs, William A Wheeler, Beatrice S Melin, Patricia Hartge, GliomanScan Consortium, Meredith Yeager, Charles C Chung, Stephen J Chanock, Nilanjan Chatterjee: A subset-based approach improves power and interpretation for the combined-analysis of genetic association studies of heterogeneous traits. Am J Hum Genet 2012 May 4;90(5):821-835.

10. Idan Menashe, Dennis Maeder, Montserrat Garcia-Closas, Jonine D. Figueroa, Samsiddhi Bhattacharjee, Melissa Rotunno, Peter Kraft, David J. Hunter, Stephen J. Chanock, Philip S. Rosenberg, and Nilanjan Chatterjee: Pathway analysis of breast cancer genome wide association study highlights three pathways and one canonical signaling cascade. Cancer Res 2010 Jun 1;70(11):4453-9. Epub 2010 May 11.


11. Samsiddhi Bhattacharjee, Zhaoming Wang, Julia Ciampa, Peter Kraft, Stephen Chanock, Kai Yu, Nilanjan Chatterjee: Using Principal Components of Genetic Variation for Robust and Powerful Detection of Gene-Gene Interactions in Case-Control and Case-Only Studies, Am J Hum Genet 2010 Mar 12;86(3):331-42.


12. Brian J. Henson, Samsiddhi Bhattacharjee, Dawn O’Dee, Eleanor Feingold, Susanne M. Gollin: The Expression of miR-125b and miR-100 in OSCC and Their Contribution to Malignancy, Genes Chromosomes Cancer 2009 Jul;48(7):569-82.

13. Samsiddhi Bhattacharjee, Chia-Ling Kuo, Nandita Mukhopadhyay, Guy N. Brock, Daniel E. Weeks and Eleanor Feingold: Robust score statistics for QTL linkage analysis, Am J Hum Genet 2008 Mar;82(3):567-582.

14. Nandita Mukhopadhyay, Indrani Halder, Samsiddhi Bhattacharjee, Daniel E. Weeks: Two-dimensional linkage analyses of rheumatoid arthritis, BMC Proceedings 2007 Dec; I (Suppl I):568.


15. Haydar Sengul, Samsiddhi Bhattacharjee, Eleanor Feingold, Daniel E. Weeks: The elusive goal of pedigree weights, Genet Epidemiol 2007 Jan;31(1):51-65.


16. Saurabh Ghosh, Samsiddhi Bhattacharjee, Gourab Basu, Sandip Pal, Partha P Majumder: Linkage mapping of a complex trait in the New York population of the GAW14 simulated dataset: a multivariate phenotype approach, BMC Genet 2005 Dec 30;6 Suppl 1:S19