Publications and Presentations

Wellcome -DBT IA funded:

1. Ramesh A, Seminars in Cell Dev. Biol. 2015 Oct. “Second messenger-sensing riboswitches in bacteria.”

Other publications:

2. Furukawa K*, Ramesh A*, Zhou Z*, Weinberg Z, Vallery T, Winkler W.C, Breaker R.R. “Bacterial riboswitches cooperatively bind Ni(2+) or Co(2+) ions and control expression of heavy metal transporters”. Mol. Cell. 2015 Vol 57, 1088-1098.

3. DebRoy S, Gebbie M, Ramesh A, van Hoof A, Winkler W.C, Garsin D.A. (2014). “A riboswitch-containing sRNA that controls gene expression by sequestration of a response regulator”. Science, 2014, 345(6199):937-40

4. Ramesh A, Winkler W.C. “Control of gene expression by metabolite-binding ribozymes”. BBA Gene Regulatory Mechanisms. 2014 Oct;1839(10):989-994

5. Ramesh A*, DebRoy S*, Goodson J.R, Fox K.A, Faz H, Garsin D.A, Winkler W.C.  “The mechanism for RNA recognition by ANTAR regulators of gene expression”. PLoS Genetics. 2012 June; 8(6).

6. Ramesh A*, Wakeman C.A. and Winkler W.C*. “Insights into metalloregulation by the M-box riboswitch” J. Mol. Biol. 2011 Apr 8; 8 (407):556-570.

7. Ramesh A and Winkler W.C. “Magnesium sensing riboswitches in bacteria” RNA Biology 2010 Jan; 1, 7(77-83).

8. Wakeman C.A, Ramesh A, Winkler W.C. “Multiple metal-binding cores are required for metalloregulation by M-box riboswitch RNAs.” J. Mol. Biol. 2009 Sep 25;392(3):723-35.

9. Fox KA*, Ramesh A*, Stearns JE, Bourgogne A, Reyes-Jara A, Winkler WC, Garsin DA. “Multiple posttranscriptional regulatory mechanisms partner to control ethanolamine utilization in Enterococcus faecalis.Proc. Natl. Acad. Sci. 2009 Mar 17;106(11):4435-40.

10. Ramesh A, Savva CG, Holzenburg A, Sacchettini JC. “Crystal structure of Rsr, an ortholog of the antigenic Ro protein, links conformational flexibility to RNA binding activity. J. Biol. Chem. 2007 May 18;282(20):14960-7.

11. Liu T*, Ramesh A*, Ma Z, Ward SK, Zhang L, George GN, Talaat AM, Sacchettini JC, Giedroc DP. “CsoR is a novel Mycobacterium tuberculosis copper-sensing transcriptional regulator.Nature Chem. Biol. 2007 Jan;3(1):60-8. *co-first authors