Publications and Presentations

1.     Thakur RK,   Yadav VK,  KumarA,  Singh A, Pal K,   Hoeppner L, Saha D, Purohit G, Basundra R,  Kar A, Halder R, Kumar P,  Baral A, Mahesh Kumar MJ,  Baldi A, Vincenzi B, Lorenzon L,  Banerjee R,  Kumar P,  Shridhar V,  Mukhopadhyay D, and  Chowdhury S*. Non-metastatic 2 (NME2)-mediated suppression of lung cancer metastasis involves transcriptional regulation of key cell adhesion factor vinculin Nucleic Acids Res. 2014 Oct 13; 42(18): 11589–11600.

2.     Yadav VK,  Thakur RK ,  Eckloff B,  Baral A,   Singh A, Halder R,  Kumar A,  Parwez Alam M,  Kundu TK, Pandita R, Pandita TK ,  Wieben ED , and  Chowdhury S*.  Promoter-proximal transcription factor binding is transcriptionally active when coupled with nucleosome repositioning in immediate vicinity Nucleic Acids Res. 2014 Sep 2; 42(15): 9602–9611

3.      Yadav VK,  Kumar A,  Mann A,  Aggarwal S, Kumar M,  Roy SD,  Pore SK,  Banerjee R,  Kumar JM,  Thakur RK, and  Chowdhury S*. Engineered reversal of drug resistance in cancer cells—metastases suppressor factors as change agents Nucleic Acids Res. 2014 Jan; 42(2): 764–773.

4.     Kar A and  Chowdhury S*Inhibition of telomerase activity by NME2: impact on metastasis suppression? Naunyn Schmiedebergs Arch Pharmacol. 2015 Feb; 388(2):235-41. doi: 10.1007/s00210-014-1077-y.

5.     SK Alam , VK Yadav , S Bajaj , A Datta , SK Dutta , M Bhattacharyya , S Bhattacharya , S Debnath , S Roy , LA Boardman , TC Smyrk , JR Molina , S Chakrabarti , S Chowdhury, D Mukhopadhyay and S Roychoudhury*, DNA damage-induced ephrin-B2 reverse signaling promotes chemoresistance and drives EMT in colorectal carcinoma harboring mutant p53. Cell Death and Differentiation (2015), 1–16.

6.     Dhapola PChowdhury SQuadBase2: web server for multiplexed guanine quadruplex mining and visualization. Nucleic Acids Res. 2016 Jul 8; 44(W1):W277-W283.

7.     Narang P, Dhapola P, Chowdhury S*. BreCAN-DB: a repository cum browser of personalized DNA breakpoint profiles of cancer genomes. Nucleic Acids Res. 2016 Jan 4;44 (D1):D952-8. doi: 10.1093/nar/gkv1264.

8.     Pawan Kumar Y, Saha P, Saha D, Bessi I, Schwalbe H, Chowdhury S, and Dash J* Fluorescent Dansyl-Guanosine Conjugates that Bind c-MYC Promoter G-Quadruplex and Downregulate c-MYC Expression Chembiochem. 2016 Mar 2; 17(5):388-93.

9.     Saha D, Singh A, Hussain T, Srivastava V, Sengupta S, Kar A, Dhapola P, Dhople V, Ummani R, Chowdhury S.* Epigenetic suppression of human telomerase (hTERT) is mediated by the metastasis suppressor NME2 in G-quadruplex dependent fashion. J Biol Chem. 2017 [Epub ahead of print]

10.    Hussain T, Saha D, Purohit G, Kar A, Kishore Mukherjee A, Sharma S, Sengupta S, Dhapola P, Maji B, Vedagopuram S, Horikoshi NT, Horikoshi N, Pandita RK, Bhattacharya S, Bajaj A, Riou JF, Pandita TK, Chowdhury S.*  Transcription regulation of CDKN1A (p21/CIP1/WAF1) by TRF2 is epigenetically controlled through the REST repressor complex.  Sci Rep. 2017 Sep 14;7(1):11541. doi: 10.1038/s41598-017-11177-1.